Data from: "Diagnostic SNPs for inferring population structure in American mink (Neovison vison) identified through RAD sequencing" in Genomic Resources Notes accepted 1 October 2014 to 30 November 2014

  • Janne Pia Thirstrup (Contributor)
  • Aritz Ruiz-Gonzalez (Contributor)
  • Jose Martin Pujolar (Contributor)
  • Peter Foged Larsen (Contributor)
  • Rasmus O. Nielsen (Contributor)
  • Ettore Randi (Contributor)
  • Andrzej Zalewski (Contributor)
  • Cino Pertoldi (Contributor)

Dataset

Description

The article documents the public availability of RAD sequencing data and generated SNPs for the American mink (Neovison vison). 224,095 polymorphic loci were identified from 14 mink from which primers were designed for a subset of 380 SNPs. The panel was tested on 211 mink. Fisher’s F-statistics (Fis, FIT and FST) as well as observed (HO), expected (HE) and unbiased expected (uHE) heterozygosity was calculated for the SNPs and 194 SNPs was validated as being useful for population genetic studies.
Date made available23 Jan 2015
PublisherDryad Digital Repository

Cite this

Thirstrup, J. P. (Contributor), Ruiz-Gonzalez, A. (Contributor), Pujolar, J. M. (Contributor), Larsen, P. F. (Contributor), Nielsen, R. O. (Contributor), Randi, E. (Contributor), Zalewski, A. (Contributor), Pertoldi, C. (Contributor) (23 Jan 2015). Data from: "Diagnostic SNPs for inferring population structure in American mink (Neovison vison) identified through RAD sequencing" in Genomic Resources Notes accepted 1 October 2014 to 30 November 2014. Dryad Digital Repository. 10.5061/dryad.85sh7